IBIS-Flora

Angiosperm Flora of India

Literature

Authors	Year	Title
OKUYAMA, YUDAI, Kanzaki, H, Abe, A, Yoshida, K, Tamiru, M, Saitoh, H, Fujibe, T, Matsumura, H, Shenton, M, Galam, DClark, Undan, J, Ito, A, Sone, T, Terauchi, R	2011	A multifaceted genomics approach allows the isolation of the rice Pia-blast resistance gene consisting of two adjacent NBS-LRR protein genes
Li, F, Liu, FH, Morinaga, D, Zhao, Z	2011	A new gene for hybrid sterility from a cross between Oryza sativa and O. glaberrima
LIU, QINSONG, YUAN, MENG, ZHOU, YAN, Li, X, Xiao, J, Wang, S	2011	A paralog of the MtN3/saliva family recessively confers race-specific resistance to Xanthomonas oryzae in rice
Kusumi, K, Sakata, C, Nakamura, T, Kawasaki, S, Yoshimura, A, Iba, K	2011	A plastid protein NUS1 is essential for build-up of the genetic system for early chloroplast development under cold stress conditions
Rigault, P, Boyle, B, Lepage, P, COOKE, JANICEEK, Bousquet, J, MacKay, JJ	2011	A White Spruce Gene Catalog for Conifer Genome Analyses
Skøt, L, SANDERSON, RUTH, Thomas, A, Skøt, K, Thorogood, D, Latypova, G, Asp, T, Armstead, I	2011	Allelic Variation in the Perennial Ryegrass FLOWERING LOCUS T Gene Is Associated with Changes in Flowering Time across a Range of Populations
Yokosho, K, Yamaji, N, Ma, JFeng	2011	An Al-inducible MATE gene is involved in external detoxification of Al in rice
Lu, J, Ju, H, Zhou, G, Zhu, C, Erb, M, Wang, X, Wang, P, Lou, Y	2011	An EAR-motif-containing ERF transcription factor affects herbivore-induced signaling, defense and resistance in rice
Yonekura-Sakakibara, K, Hanada, K	2011	An evolutionary view of functional diversity in family 1 glycosyltransferases
Saika, H, Oikawa, A, Matsuda, F, Onodera, H, Saito, K, Toki, S	2011	Application of Gene Targeting to Designed Mutation Breeding of High-Tryptophan Rice
Gallavotti, A, Malcomber, S, Gaines, C, Stanfield, S, Whipple, C, Kellogg, E, Schmidt, RJ	2011	BARREN STALK FASTIGIATE1 Is an AT-Hook Protein Required for the Formation of Maize Ears
Yang, W, Ren, S, Zhang, X, Gao, M, Ye, S, Qi, Y, Zheng, Y, Wang, J, Zeng, L, Li, Q, Huang, S, He, Z	2011	BENT UPPERMOST INTERN0DE1 Encodes the Class II Formin FH5 Crucial for Actin Organization and Rice Development
NOCITO, FABIOFRANCESCO, LANCILLI, CLARISSA, DENDENA, BIANCA, LUCCHINI, GIORGIO, SACCHI, GIANATTILIO	2011	Cadmium retention in rice roots is influenced by cadmium availability, chelation and translocation
Wu, R, Li, S, He, S, Waßmann, F, Yu, C, Qin, G, Schreiber, L, Qu, L-J, Gu, H	2011	CFL1, a WW Domain Protein, Regulates Cuticle Development by Modulating the Function of HDG1, a Class IV Homeodomain Transcription Factor, in Rice and Arabidopsis
Fujita, D, Santos, RE, Ebron, LA, Fukuta, Y, Kobayashi, N	2011	Characterization of quantitative trait locus for days to heading in near-isogenic lines with genetic background of Indica-type rice variety IR64 (Oryza sativa)
Dionisio, G, Madsen, CK, Holm, PB, Welinder, KG, Jørgensen, M, Stoger, E, Arcalis, E, Brinch-Pedersen, H	2011	Cloning and Characterization of Purple Acid Phosphatase Phytases from Wheat, Barley, Maize, and Rice
MOVAHEDI, SARA, Van de Peer, Y, Vandepoele, K	2011	Comparative Network Analysis Reveals That Tissue Specificity and Gene Function Are Important Factors Influencing the Mode of Expression Evolution in Arabidopsis and Rice
Matsumoto, T, Tanaka, T, Sakai, H, Amano, N, Kanamori, H, Kurita, K, Kikuta, A, Kamiya, K, Yamamoto, M, Ikawa, H, Fujii, N, Hori, K, Itoh, T, Sato, K	2011	Comprehensive Sequence Analysis of 24,783 Barley Full-Length cDNAs Derived from 12 Clone Libraries
Fan, C, Walling, JG, Zhang, J, Hirsch, CD, Jiang, J, Wing, RA	2011	Conservation and Purifying Selection of Transcribed Genes Located in a Rice Centromere
Ambavaram, MMR, Krishnan, A, Trijatmiko, KR, Pereira, A	2011	Coordinated Activation of Cellulose and Repression of Lignin Biosynthesis Pathways in Rice
Touré, A, Rodenburg, J, Saito, K, Oikeh, S, Futakuchi, K, Gumedzoe, D, Huat, J	2011	Cultivar and Weeding Effects on Weeds and Rice Yields in a Degraded Upland Environment of the Coastal Savanna
Seo, S, Mitsuhara, I, Feng, J, Iwai, T, Hasegawa, M, Ohashi, Y	2011	Cyanide, a Coproduct of Plant Hormone Ethylene Biosynthesis, Contributes to the Resistance of Rice to Blast Fungus
Yamori, W, Sakata, N, Suzuki, Y, Shikanai, T, Makino, A	2011	Cyclic electron flow around photosystem I via chloroplast NAD(P)H dehydrogenase (NDH) complex performs a significant physiological role during photosynthesis and plant growth at low temperature in rice
WANG, QIANG, Hillwig, ML, Peters, RJ	2011	CYP99A3: functional identification of a diterpene oxidase from the momilactone biosynthetic gene cluster in rice
Shi, J, Tan, H, Yu, X-H, Liu, Y, Liang, W, Ranathunge, K, Franke, RBenni, Schreiber, L, Wang, Y, Kai, G, Shanklin, J, MA, HONG, Zhang, D	2011	Defective Pollen Wall Is Required for Anther and Microspore Development in Rice and Encodes a Fatty Acyl Carrier Protein Reductase
Chin, J, Gamuyao, R, Dalid, C, Bustamam, M, Prasetiyono, J, Moeljopawiro, S, WISSUWA, M, Heuer, S	2011	Developing Rice with High Yield under Phosphorus Deficiency: Pup1 Sequence to Application
Shingaki-Wells, RN, Huang, S, Taylor, NL, Carroll, AJ, Zhou, W, A. Millar, H	2011	Differential Molecular Responses of Rice and Wheat Coleoptiles to Anoxia Reveal Novel Metabolic Adaptations in Amino Acid Metabolism for Tissue Tolerance
Tsai, H, Howell, T, Nitcher, R, Missirian, V, Watson, B, Ngo, KJ, Lieberman, M, Fass, J, Uauy, C, Tran, RK, Khan, AAli, Filkov, V, Tai, TH, Dubcovsky, J, Comai, L	2011	Discovery of Rare Mutations in Populations: TILLING by Sequencing
Sakai, H, Ikawa, H, Tanaka, T, Numa, H, Minami, H, Fujisawa, M, Shibata, M, Kurita, K, Kikuta, A, Hamada, M, Kanamori, H, Namiki, N, Wu, J, Itoh, T, Matsumoto, T, Sasaki, T	2011	Distinct evolutionary patterns of Oryza glaberrima deciphered by genome sequencing and comparative analysis
Ohnishi, T, Takanashi, H, Mogi, M, Takahashi, H, Kikuchi, S, YANO, KENTARO, Okamoto, T, Fujita, M, Kurata, N, Tsutsumi, N	2011	Distinct Gene Expression Profiles in Egg and Synergid Cells of Rice as Revealed by Cell Type-Specific Microarrays
Onda, Y, Nagamine, A, Sakurai, M, Kumamaru, T, Ogawa, M, Kawagoe, Y	2011	Distinct Roles of Protein Disulfide Isomerase and P5 Sulfhydryl Oxidoreductases in Multiple Pathways for Oxidation of Structurally Diverse Storage Proteins in Rice
Morey, C, Mookherjee, S, Rajasekaran, G, Bansal, M	2011	DNA Free Energy-Based Promoter Prediction and Comparative Analysis of Arabidopsis and Rice Genomes
Fang, J, Matsuzaki, M, Suzuki, H, Wusiman, Y, Goto, M, Horiguchi, K-I, Takahashi, T	2011	Effects of adding a monosodium glutamate fermented by-product on the fermentation quality of whole crop rice (Oryza sativa L.) silage, digestibility and ruminal fermentation in beef cattle
Mohammed, AR, Tarpley, L	2011	Effects of Night Temperature, Spikelet Position and Salicylic Acid on Yield and Yield-Related Parameters of Rice (Oryza sativa L.) Plants
Matsubara, K, Yamanouchi, U, Nonoue, Y, Sugimoto, K, Wang, Z-X, Minobe, Y, Yano, M	2011	Ehd3, encoding a plant homeodomain finger-containing protein, is a critical promoter of rice flowering
PTASHNYK, MARIYA, ROOSE, TIINA, JONES, DAVEYL, KIRK, GUYJD	2011	Enhanced zinc uptake by rice through phytosiderophore secretion: a modelling study
Wu, Y, Kikuchi, S, Yan, H, Zhang, W, Rosenbaum, H, A. Iniguez, L, Jiang, J	2011	Euchromatic Subdomains in Rice Centromeres Are Associated with Genes and Transcription
Wakasa, Y, Yasuda, H, Oono, Y, Kawakatsu, T, Hirose, S, Takahashi, H, Hayashi, S, Yang, L, Takaiwa, F	2011	Expression of ER quality control-related genes in response to changes in BiP1 levels in developing rice endosperm
Peña-Castro, JM, Van Zanten, M, Lee, SC, Patel, MR, Voesenek, LAJC, Fukao, T, Bailey-Serres, J	2011	Expression of rice SUB1A and SUB1C transcription factors in Arabidopsis uncovers flowering inhibition as a submergence tolerance mechanism
Wicker, T, Mayer, KFX, Gundlach, H, Martis, M, Steuemagel, B, Scholz, U, Šimková, H, Kubaláková, M, Choulet, F, Taudien, S, Platzer, M, Feuillet, C, Fahima, T, BUDAK, HIKMET, Doležel, J, Keller, B, Stein, N	2011	Frequent Gene Movement and Pseudogene Evolution Is Common to the Large and Complex Genomes of Wheat, Barley, and Their Relatives
Dreni, L, Pilatone, A, Yun, D, Erreni, S, Pajoro, A, Caporali, E, Zhang, D, Kater, MM	2011	Functional Analysis of All AGAMOUS Subfamily Members in Rice Reveals Their Roles in Reproductive Organ Identity Determination and Meristem Determinacy
Higuchi-Takeuchi, M, Ichikawa, T, Kondou, Y, Matsui, K, Hasegawa, Y, Kawashima, M, Sonoike, K, Mori, M, Hirochika, H, Matsui, M	2011	Functional Analysis of Two Isoforms of Leaf-Type Ferredoxin-NADP⁺-Oxidoreductase in Rice Using the Heterologous Expression System of Arabidopsis
Gui, J, Shen, J, Li, L	2011	Functional Characterization of Evolutionarily Divergent 4-Coumarate:Coenzyme A Ligases in Rice
Utsumi, Y, Utsumi, C, Sawada, T, Fujita, N, Nakamura, Y	2011	Functional Diversity of Isoamylase Oligomers: The ISA1 Homo-Oligomer Is Essential for Amylopectin Biosynthesis in Rice Endosperm
Ishikawa, C, Hatanaka, T, Misoo, S, Miyake, C, Fukayama, H	2011	Functional Incorporation of Sorghum Small Subunit Increases the Catalytic Turnover Rate of Rubisco in Transgenic Rice
Ficklin, SP, F. Feltus, A	2011	Gene Coexpression Network Alignment and Conservation of Gene Modules between Two Grass Species: Maize and Rice
Zhu, B-F, Si, L, Wang, Z, ZHOU, YAN, Zhu, J, Shangguan, Y, Lu, D, Fan, D, Li, C, Lin, H, Qian, Q, Sang, T, Zhou, B, Minobe, Y, Han, B	2011	Genetic Control of a Transition from Black to Straw-White Seed Hull in Rice Domestication
Rajkumar, G, Weerasena, J, Fernando, K, Liyanage, A, Silva, R	2011	Genetic differentiation among Sri Lankan traditional rice (Oryza sativa) varieties and wild rice species by AFLP markers
Li, H, Liang, W, Yin, C, Zhu, L, Zhang, D	2011	Genetic Interaction of OsMADS3, DROOPING LEAF, and OsMADS13 in Specifying Rice Floral Organ Identities and Meristem Determinacy
Jahn, CE, MCKAY, JOHNK, Mauleon, R, Stephens, J, McNally, KL, Bush, DR, Leung, H, Leach, JE	2011	Genetic Variation in Biomass Traits among 20 Diverse Rice Varieties

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